Information for 11-ACAGCAAGGGGGC (Motif 7)

C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C A G T C A G T C A G T C A C G T C G A T A C T G A G T C A C G T A C T G A G C T
p-value:1e-12
log p-value:-2.770e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.9 +/- 14.7bp
Average Position of motif in Background46.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAAGGGGGC
CACAGCAGGGGG--
 A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAAGGGGGC
CACAGCGGGGGGTC
 A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCAAGGGGGC
DCHCAGCAGGRGGCC
 A C G T A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACAGCAAGGGGGC-
--TGTCAGGGGGCG
 C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCAAGGGGGC
NCGCAGCGGGGGGTC
 A C G T A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAAGGGGGC
CACAGN--------
 A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCAAGGGGGC
NCNCAGCGGGGGGTC
 A C G T A C G T C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACAGCAAGGGGGC------
--NNNAAGGGGGCGGGNNN
 C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAGCAAGGGGGC
ACAGGAAGTG---
 C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAGCAAGGGGGC
ACAGGATGTGGT-
 C T G A A G T C C G T A A C T G G T A C G C T A C G T A A C T G C T A G A C T G A C T G C T A G A G T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T