Information for 9-GAAGTAGCGAAGG (Motif 5)

A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A C G T A T G C A T C G A G T C A C G T C G T A A G T C A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 30.5bp
Average Position of motif in Background89.1 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAGTAGCGAAGG----
GGAAGGAAGGAAGGAAGG
 A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAGTAGCGAAGG
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTAGCGAAGG------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAGTAGCGAAGG----
---GTTGCCATGGNAAC
 A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAAGTAGCGAAGG
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTAGCGAAGG
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAGTAGCGAAGG--
NNNGTAACTANGNNA
 A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTAGCGAAGG
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAGTAGCGAAGG--
NNCGTTGCTATGGNN
 A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAGTAGCGAAGG
-CTGTTGCTAGGS
 A C T G G T C A C G T A A C T G C G A T C G T A A C T G A T G C A T C G C G T A C G T A A C T G C T A G
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G