Information for 8-TGGTCTCCAGTGA (Motif 4)

A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
Reverse Opposite:
A C G T G T A C T C G A A G T C A C G T A C T G A C T G C G T A T A C G C G T A G T A C G T A C G T C A
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.815
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 20.3bp
Average Position of motif in Background67.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCTCCAGTGA-
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCTCCAGTGA-----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGTCTCCAGTGA
--TTTTCCA----
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGTGA
-NGTCCCNNGGGA
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGTGA
-ATTTTCCATT--
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGTCTCCAGTGA----
NANTTTCAAGTGGTTAN
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGTCTCCAGTGA----
NNNANTGCAGTGCNNTT
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGTGA
-ATTTTCCATT--
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGTGA--
-NGTTGCCATGGCAA
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGTGA
-ATTTTCCATT--
 A C G T A C T G A C T G A C G T A G T C A C G T A G T C A G T C C G T A C T A G A G C T A C T G T G C A
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T