Information for 4-AGAGGGAGCC (Motif 2)

T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
Reverse Opposite:
C A T G T A C G A T G C C G A T T G A C A G T C A T G C A C G T A T G C A G C T
p-value:1e-25
log p-value:-5.758e+01
Information Content per bp:1.824
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.64%
Number of Background Sequences with motif371.3
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets52.2 +/- 26.3bp
Average Position of motif in Background49.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCC
---CGGAGC-
 T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCC
GGGCGGGAAGG
 A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCC-----
TTGGGGGCGCCCCTAG
 A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGGGAGCC
--AGCGCGCC
 T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAGGGAGCC
GGCGGGAARN
 T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGAGCC
GRTGMTRGAGCC
 A C G T A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGAGCC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCC---
---GGGAGGACNG
 T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCC
GGGCGGGACC-
 A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGGGAGCC----------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T C A T A C G A C T G A C T G C G T A A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T