Information for 6-CTRYCWCMAGRYGSMA (Motif 9)

A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
Reverse Opposite:
A C G T A C G T A T G C A G T C C T G A A G C T A G T C A C G T A C G T A C T G C G T A C T A G C T A G A G C T C G T A A C T G
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.808
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.4 +/- 25.6bp
Average Position of motif in Background53.6 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA----
TGGCCACCAGGTGGCACTNT
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTRYCWCMAGRYGSMA---
TGGCCACCAGGGGGCGCTA
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA------
--GCCASCAGGGGGCGCYVNNG
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA
--GTCACATGAY----
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTRYCWCMAGRYGSMA---
--ATCCACAGGTGCGAAAA
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CTRYCWCMAGRYGSMA
--------AGGTGTCA
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA
-----NNCAGGTGCG-
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA
-----NNCAGGTGNN-
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA
-----AACAGATGGC-
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTRYCWCMAGRYGSMA
-----AACAGGTGNT-
 A G T C A C G T C T G A A G T C A G T C C G A T A G T C G T C A C G T A A C T G T C G A G A C T A C T G A T C G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T