Information for 13-AGAGCGAGAG (Motif 24)

C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T G A T C C A T G A G T C A C G T A G T C A G C T
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.881
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif207.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets42.5 +/- 22.1bp
Average Position of motif in Background48.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAGCGAGAG----
TTGACCGAGAATTCC
 A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCGAGAG----
NNNACCGAGAGTNNN
 A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCGAGAG-
GAAAGTGAAAGT
 A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGAGCGAGAG---
AGAAAGTGAAAGTGA
 A C G T A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAGCGAGAG-
-GAGSCCGAGC
 C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAGCGAGAG
AGAGGAAGTG
 C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCGAGAG----
GNNACCGAGAATNNN
 A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGAGCGAGAG------
GGAAAGCGAAACCAAAAC
 A C G T A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGCGAGAG-
GAAASYGAAASY
 A C G T C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAGCGAGAG--
-GGGCGGGAAGG
 C T G A C T A G C G T A A C T G G T A C C T A G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G