Information for 11-CTTGGCCACA (Motif 19)

T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
Reverse Opposite:
A C G T A T C G A G C T C T A G T C A G T A G C T A G C G T C A C T G A A C T G
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.621
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif214.2
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets50.1 +/- 29.6bp
Average Position of motif in Background47.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTGGCCACA---
-NWAACCACADNN
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCACA---
--AAACCACAGAN
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGGCCACA-
SCCTAGCAACAG
 A C G T T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCACA
NTTGGCANN-
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGCCACA
TGATTGGCTANN
 A C G T A C G T T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTTGGCCACA
-TTGGCA---
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCACA
CTAGGCCT--
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTGGCCACA
-CTGCCCGCA
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCACA--
--AAACCACAGC
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTTGGCCACA-----
---GGCCACACCCAN
 T G A C G A C T C A G T A T C G A T C G A G T C G A T C T C G A T A G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G