Information for 10-TCCTCTGCTGGCT (Motif 11)

C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
Reverse Opposite:
G T C A C T A G A G T C T A G C C G T A A T C G A T G C G C T A C T A G G T C A C T A G A T C G G C T A
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.780
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif70.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.7 +/- 25.5bp
Average Position of motif in Background49.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCCTCTGCTGGCT-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------TCCTCTGCTGGCT
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TCCTCTGCTGGCT-
---------NGCTN
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCCTCTGCTGGCT--
-----TGCTGACTCA
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TCCTCTGCTGGCT-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCCTCTGCTGGCT
-DCTCAGCAGG--
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCTGCTGGCT
TTCCTCT-------
 A C G T C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TCCTCTGCTGGCT
-------TTGGCA
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCCTCTGCTGGCT--
------NTTGGCANN
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCCTCTGCTGGCT
CCCCCTGCTGTG-
 C A G T A T G C A G T C A C G T A G T C C G A T A T C G A T G C C G A T A C T G C T A G A G T C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T