Information for 3-AAGCYCAAAAGCARGC (Motif 4)

C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
Reverse Opposite:
A T C G G T A C A G T C A G C T C T A G G A T C G A C T A C G T A G C T A C G T A C T G C T A G A T C G A G T C C G A T A C G T
p-value:1e-14
log p-value:-3.293e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 28.7bp
Average Position of motif in Background55.2 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCYCAAAAGCARGC
CAAGGHCANV-------
 A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGCYCAAAAGCARGC
AAGGTCAC--------
 C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCYCAAAAGCARGC
AAAGATCAAAGG-----
 A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGCYCAAAAGCARGC
TCAAGGTCAT--------
 A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCYCAAAAGCARGC
TCAAGGTCATA-------
 A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGCYCAAAAGCARGC
AAAGATCAAAGGGTT--
 A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGCYCAAAAGCARGC
BTCAAGGTCA---------
 A C G T A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGCYCAAAAGCARGC
TCAAGGTCAN--------
 A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGCYCAAAAGCARGC
NTCAAGGTCA---------
 A C G T A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAGCYCAAAAGCARGC
TATTCAAGGTCATGCGA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C G A T C A G T C G T C A C T G A G T C A C G T A C T A G G A T C C T G A C T A G A C T G T A G C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T A C G T A C G T A C G T