Information for 15-CAAGGVWGCCAGYGGM (Motif 31)

A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
Reverse Opposite:
A C T G A G T C A G T C T C G A A G T C A C G T A C T G C A T G A T G C C G A T A C G T A T G C A G T C A G C T A G C T T A C G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.654
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif108.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.5 +/- 25.6bp
Average Position of motif in Background49.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAAGGVWGCCAGYGGM
------TGCCAA----
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAAGGVWGCCAGYGGM
----CGTGCCAAG---
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGVWGCCAGYGGM
TGGCAGNCTGCCAG----
 A C G T A C G T A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAAGGVWGCCAGYGGM
------AGCCAATCGG
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAAGGVWGCCAGYGGM
----GGTGCCAAGT--
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAAGGVWGCCAGYGGM
GGGRAARRGRMCAGMTG-
 A C G T A C G T A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CAAGGVWGCCAGYGGM
-------RACAAWGG-
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAAGGVWGCCAGYGGM-
------TGCCTGAGGCN
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CAAGGVWGCCAGYGGM
-------AACAAAGG-
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAAGGVWGCCAGYGGM-
------NGCCTGAGGCN
 A T G C T C G A C T G A C T A G A T C G T G C A C G T A A T C G G A T C G T A C C G T A C T A G A G C T C T A G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G