Information for 14-AGAGGTTCSCCCCKCC (Motif 30)

C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G G T A C A C T G T A C G A C T G A C T G A T G C C A T G C T G A C T G A A G T C A G T C A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 33.4bp
Average Position of motif in Background55.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGTTCSCCCCKCC
NNNNGGTACCCCCCANN
 A C G T C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGAGGTTCSCCCCKCC
-GGGGATTCCCCC---
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGGTTCSCCCCKCC
AGGGGATTCCCCT---
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGAGGTTCSCCCCKCC---
--AAATTCCCCCCGGAAGT
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGGTTCSCCCCKCC
AGGGGAATCCCCT---
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTTCSCCCCKCC
TCTCAAAGGTCACCTG----
 A C G T A C G T A C G T A C G T C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGTTCSCCCCKCC
ANGNAAAGGTCA--------
 A C G T A C G T A C G T A C G T C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AGAGGTTCSCCCCKCC------
-----TACGCCCCGCCACTCTG
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AGAGGTTCSCCCCKCC
--------CCCCCCCC
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGAGGTTCSCCCCKCC--
--------GCCCCGCCCC
 C G T A C T A G G T C A C T A G A C T G A G C T G A C T G A T C A T C G A G T C A G T C A G T C T G A C A C T G A T G C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C