Information for 12-GVAAAGCCTTTSCHKG (Motif 27)

T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
Reverse Opposite:
G A T C G T A C C T A G A C T G T A G C G T C A C G T A C T G A C T A G T A C G G T A C A G C T C G A T A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.031e+01
Information Content per bp:1.634
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif339.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets49.5 +/- 25.3bp
Average Position of motif in Background52.3 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GVAAAGCCTTTSCHKG
AGGGAAGTCATTTCT--
 A C G T T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GVAAAGCCTTTSCHKG
-CAAAGGCGTGGCCAG
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GVAAAGCCTTTSCHKG--
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GVAAAGCCTTTSCHKG
--CAAGCTT-------
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GVAAAGCCTTTSCHKG--
NNNGCATGTCNNGACATGCN
 A C G T A C G T T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GVAAAGCCTTTSCHKG----
AACATGCCCAGACATGCCCN
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GVAAAGCCTTTSCHKG----
AACATGCCCAGACATGCCCN
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GVAAAGCCTTTSCHKG
-CNAGGCCT-------
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GVAAAGCCTTTSCHKG
--CAGGCCNNGGCCNN
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GVAAAGCCTTTSCHKG
GVACAGNMTGTYCTB-
 T C A G T C A G G T C A C G T A C T G A C A T G A T G C A G T C A G C T G C A T C A G T A T C G A G T C G A T C C A T G C T A G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T