Information for 10-WGMKCTGMSAGAC (Motif 19)

C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C A C G T A T C G A C G T A G T C C G T A A C T G G T A C A C T G A G T C G C T A
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.834
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.8 +/- 21.9bp
Average Position of motif in Background47.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:WGMKCTGMSAGAC-
--AGGTGHCAGACA
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC--
--AGGTGNCAGACAG
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC-
----ATGCCAGACN
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC--
-------CCAGACAG
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC----
-------CCAGACRSVB
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC
---VBTGWCAGCB
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGMKCTGMSAGAC
GGTGYTGACAGS-
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC
---RHTGWCAR--
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WGMKCTGMSAGAC------
--CAAATCCAGACATCACA
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WGMKCTGMSAGAC
--ARNTGACA---
 C G A T A C T G G T A C A C T G A G T C A C G T A C T G G T C A T A G C C G T A A C T G C G T A A G T C
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T