Information for 9-GCAAGKCYTCWKT (Motif 18)

A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C C G A T A C T G C G T A C T G A A C T G G T A C A G T C A C G T A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 11.1bp
Average Position of motif in Background48.2 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCAAGKCYTCWKT
-CNAGGCCT----
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAAGKCYTCWKT
-TAAGGCGTCTTG
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAAGKCYTCWKT
AAGGCAAGTGT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAAGKCYTCWKT
-CTAGGCCT----
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAAGKCYTCWKT
-CAAGGHCANV--
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAAGKCYTCWKT
GCTCGGSCTC---
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCAAGKCYTCWKT
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCAAGKCYTCWKT
-----GCTTCC--
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAAGKCYTCWKT
NTCAAGGTCA----
 A C G T A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCAAGKCYTCWKT
GCACGTAY-----
 A C T G A G T C C G T A C G T A A C T G A C T G G T A C A G C T A C G T A G T C C G T A A C T G A C G T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T