Information for 6-SAGYCTSGGRAGTCTC (Motif 10)

A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C
Reverse Opposite:
T C A G C T G A T C A G G T C A G A T C A G C T A G T C T A G C T G A C T A G C T G C A T A C G C T G A A T G C G C A T T A G C
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.609
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif953.0
Percentage of Background Sequences with motif1.97%
Average Position of motif in Targets49.2 +/- 23.6bp
Average Position of motif in Background49.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SAGYCTSGGRAGTCTC---
--NTNNNAGGAGTCTCNTN
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:SAGYCTSGGRAGTCTC-
-------GGGAATTTCC
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:SAGYCTSGGRAGTCTC-
-------GGGAATTTCC
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:SAGYCTSGGRAGTCTC------
-------NNAATTCTCGNTNAN
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:SAGYCTSGGRAGTCTC-
-----GGGGGAATCCCC
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SAGYCTSGGRAGTCTC-
--GYCTGGYYTNTGTCA
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SAGYCTSGGRAGTCTC-
-----NGGGGATTTCCC
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SAGYCTSGGRAGTCTC------
-------AGTATTCTCGGTTGC
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:SAGYCTSGGRAGTCTC--
-----AGGGGAATCCCCT
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:SAGYCTSGGRAGTCTC--
-----AGGGGAATCCCCT
 A T C G C G T A A T C G G A C T A T G C A C G T A T C G A C T G A T C G T C A G C T G A C T A G A C G T A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T