Information for 4-CATAAAACCCTGATTG (Motif 4)

G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
Reverse Opposite:
A T G C T C G A G T C A A C G T G T A C C G T A A C T G T A C G T C A G C G A T C G A T A C G T C A G T G C T A C G A T C A T G
p-value:1e-14
log p-value:-3.323e+01
Information Content per bp:1.637
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif135.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets52.2 +/- 19.7bp
Average Position of motif in Background47.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CATAAAACCCTGATTG-
---------TTGATTGN
 G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CATAAAACCCTGATTG
GTCATAAAAN--------
 A C G T A C G T G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATAAAACCCTGATTG
-TAAAAATGCTGACTT
 G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CATAAAACCCTGATTG
AGAGCCATAAAATTCG-----
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CATAAAACCCTGATTG
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CATAAAACCCTGATTG-----
---AGAGTGCTGATTGGTCCA
 G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CATAAAACCCTGATTG-
-------CNGTGATTTN
 G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CATAAAACCCTGATTG--------
---------CTGATTGGTCNATTT
 G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CATAAAACCCTGATTG
CCAATAAAAA--------
 A C G T A C G T G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CATAAAACCCTGATTG
AAGCCATAAAA---------
 A C G T A C G T A C G T A C G T G T A C G C T A C G A T G T C A T G C A G C T A G C T A A G T C A G T C G T A C G C A T A C T G G T C A C A G T A G C T A T C G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T