Information for 10-CAGGCTTTTCCCA (Motif 12)

A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G C G T A C T G A C G T A C G T A C T A G A G T C A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 15.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CAGGCTTTTCCCA--
-----HTTTCCCASG
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CAGGCTTTTCCCA
-----TTTTCCA-
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGGCTTTTCCCA
-GGGGATTTCC--
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGCTTTTCCCA
-GGGGATTTCC--
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGGCTTTTCCCA--
-----ATTTTCCATT
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGGCTTTTCCCA
--TKCTGTTCCA-
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGCTTTTCCCA
-GGGAATTTCC--
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGCTTTTCCCA
NGGGGATTTCCC-
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGGCTTTTCCCA--
-----ATTTTCCATT
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGCTTTTCCCA-
----ATTTTCCATT
 A G T C C G T A A C T G C T A G A G T C A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T