Information for 3-WTCCTGAARTCTSTGC (Motif 9)

C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A T G C C T G A A T C G C G T A A G C T A C G T A C G T T A G C C G T A A T C G T A C G C G T A C G T A
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.777
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.5 +/- 13.2bp
Average Position of motif in Background50.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:WTCCTGAARTCTSTGC
------AAATCACTGC
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:WTCCTGAARTCTSTGC-
------AAATCACAGCA
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:WTCCTGAARTCTSTGC
-----CAAATCACTG-
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--WTCCTGAARTCTSTGC
GGTTCCNNAATTTG----
 A C G T A C G T C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WTCCTGAARTCTSTGC----
----NNGCGTGTGTGCNGCN
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:WTCCTGAARTCTSTGC
---NTCAAGTGG----
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:WTCCTGAARTCTSTGC
GTCGTAAAAT------
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:WTCCTGAARTCTSTGC
GTCGTAAAAA------
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-WTCCTGAARTCTSTGC
GGTCGTAAAAT------
 A C G T C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:WTCCTGAARTCTSTGC
---NTCAAGTGGN---
 C G A T A C G T A T G C A T G C A C G T A C T G C G T A C G T A C T G A A C G T A T G C A G C T A T C G C G A T A T C G A G T C
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T