Information for 2-AGTTGCHTCACATGTT (Motif 4)

C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
Reverse Opposite:
G C T A C T G A A T G C C G T A C G A T C T A G C G A T A C T G C G T A C T A G A C T G A G T C C G T A C G T A A G T C A C G T
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 18.1bp
Average Position of motif in Background64.2 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTTGCHTCACATGTT
-ATTGCATCAK-----
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTTGCHTCACATGTT
-ATTGCATCAT-----
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGTTGCHTCACATGTT
--TTGCAACATN----
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTTGCHTCACATGTT
TATTGCATCATCC---
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTTGCHTCACATGTT
-ATTGCATAA------
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTTGCHTCACATGTT
-ATTGCACAATA----
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCHTCACATGTT
NNACTTGCCTT-------
 A C G T A C G T C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTTGCHTCACATGTT
ATTTGCATAA------
 C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTTGCHTCACATGTT
TTCATTTGCATAT------
 A C G T A C G T A C G T C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGTTGCHTCACATGTT
CAGGTAATTACCTCAG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T A C T G G T A C G A T C A C G T A G T C C G T A A G T C C G T A A C G T A T C G A G C T C G A T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T A C G T A C G T A C G T A C G T