Information for 3-TCCCTTGGGA (Motif 3)

A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A
Reverse Opposite:
C A G T A G T C G A T C T G A C T C G A T C G A C T A G C T A G T C A G T C G A
p-value:1e-18
log p-value:-4.241e+01
Information Content per bp:1.654
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif16.71%
Number of Background Sequences with motif3472.4
Percentage of Background Sequences with motif7.29%
Average Position of motif in Targets50.0 +/- 27.5bp
Average Position of motif in Background50.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTGGGA
NGTCCCNNGGGA
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTTGGGA--
ANTCCCTNGGGAAT
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TCCCTTGGGA--
TCCCCTGGGGAC
 A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCCCTTGGGA---
---CSTGGGAAAD
 A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTGGGA---
ATTCCCTGAGGGGAA
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTGGGA---
ATTGCCTGAGGCGAA
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCCTTGGGA--
--NNTTGGCANN
 A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTTGGGA
WTGSCCTSAGGS
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTGGGA
ATGCCCTGAGGC
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTTGGGA---
GCACCCCTGGGTGCC
 A C G T A C G T A G C T A G T C A G T C G A T C A G C T A G C T A C T G C T A G T C A G G T C A A C G T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C