Information for 13-ACTTGGCCAA (Motif 19)

C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
Reverse Opposite:
A C G T A C G T C T A G A C T G G T A C G T A C T C G A C G T A A C T G G A C T
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.833
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif200.0
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets53.4 +/- 23.9bp
Average Position of motif in Background50.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACTTGGCCAA
--TTGGCA--
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCCAA
-NTTGGCANN
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACTTGGCCAA
NNTTGGCANN
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACTTGGCCAA---
-ACTAGCCAATCA
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCCAA
-CTTGGCAA-
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCCAA
-CTAGGCCT-
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACTTGGCCAA----
----AGCCAATCGG
 C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTTGGCCAA
AAYTAGGTCA-
 A C G T C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTTGGCCAA
WDNCTGGGCA--
 A C G T A C G T C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCCAA
ACACGTGGC---
 A C G T A C G T C T G A A G T C A C G T A G C T A C T G A C T G A G T C G A T C G T C A T G C A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T