Information for 12-GGGATCACAT (Motif 18)

A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G C G T A A C G T A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.2 +/- 10.0bp
Average Position of motif in Background44.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGATCACAT
NGGATTAN--
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGGATCACAT--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGATCACAT---
--GGTCACATGAC
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGATCACAT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCACAT--
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T