Information for 11-RTCTYATGAG (Motif 17)

T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A G C A T C T A G C G T A A T C G G T C A A G T C
p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.745
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif369.7
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets53.2 +/- 24.2bp
Average Position of motif in Background49.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:RTCTYATGAG--
--NTAATGAGCT
 T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--RTCTYATGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--RTCTYATGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RTCTYATGAG----
NAATTTTACGAGNTNN
 A C G T A C G T T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:RTCTYATGAG
----CATGAC
 T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RTCTYATGAG----
ANATTTTACGAGNNNN
 A C G T A C G T T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RTCTYATGAG-
NTTTTACGAGN
 T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0058.1_Hoxb3/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RTCTYATGAG-----
TGAGCTAATTAGTTGGA
 A C G T A C G T T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RTCTYATGAG-
-TTTTATKRGG
 T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RTCTYATGAG-----
----CTTGAGTGGCT
 T C A G C A G T T A G C C G A T G A T C C G T A A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T