Information for 12-GTGTTTAATTTAA (Motif 16)

A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A G T C A C G T A A C G T A G C T C G T A G T C A C G T A A T G C C T G A A G T C
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 4.7bp
Average Position of motif in Background45.6 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGTTTAATTTAA----
GGGTTTAATTAAAATTC
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0100.1_Lmx1a/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTAATTTAA---
NNTTTTTAATTAATTCG
 A C G T A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTGTTTAATTTAA---
AGTTTTTAATTAATTTG
 A C G T A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGTTTAATTTAA
-TGTTTACTTT--
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGTTTAATTTAA
-TGTTTACTTT--
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGTTTAATTTAA
---TTTAAT----
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGTTTAATTTAA
-TGTTTATTT---
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGTTTAATTTAA
---NNTAATTAGA
 A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A

PH0095.1_Lhx5/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTAATTTAA---
ANNATTTAATTAATTNN
 A C G T A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTAATTTAA---
NNTTATTAATTAATNCN
 A C G T A C T G A G C T A T C G A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G