Information for 9-TGCAAATGTCAKT (Motif 10)

A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A T G C A C G A T A C T G T C G A A G T C C G T A A C G T A G C T C G A T A C T G G T A C C G T A
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.2 +/- 27.8bp
Average Position of motif in Background45.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGCAAATGTCAKT---
-TNGAATTTCATTNAN
 A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCAAATGTCAKT
ANGNAAAGGTCA--
 A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCAAATGTCAKT
WATGCAAATGAG---
 A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAATGTCAKT
ATATGCAAATNNN---
 A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAATGTCAKT
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAATGTCAKT
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAATGTCAKT
TTATGCAAAT------
 A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAATGTCAKT
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCAAATGTCAKT
ATATGCAAAT------
 A C G T A C G T A C G T A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCAAATGTCAKT-
--NTAATBNAATTA
 A C G T A C T G T G A C C G T A C T G A C G T A A C G T A C T G A G C T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A