Information for 6-ATGTTACATTGTTTCA (Motif 17)

C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
Reverse Opposite:
A C G T C A T G G T C A G T C A C G T A A G T C G T C A G T C A C G A T A T C G G C A T G C T A C G T A G T A C C G T A A C G T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.689
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets45.0 +/- 18.7bp
Average Position of motif in Background46.1 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
TWGHWACAWTGTWDC-
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
YDGHTACAWTGTADC-
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
-------ATTGTTA--
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
----CTCATTGTC---
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGTTACATTGTTTCA-
-ANNTCCATTGTTCNNN
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A A C G T
A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
-------ATTGTT---
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA
------CTTTGT----
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATGTTACATTGTTTCA---
---TTCAATTGTTCTAAAA
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:ATGTTACATTGTTTCA
-------ATTGTTTAN
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATGTTACATTGTTTCA-
--NNNCCATTGTGTNAN
 C G T A A C G T A C T G G A C T C G A T C G T A T A G C C G T A C A G T A C G T C T A G C G A T C A G T A C G T G T A C T C G A A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G