Information for 9-CTCGGGTGAC (Motif 16)

A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
Reverse Opposite:
C T A G G A C T A T G C C G T A A G T C A G T C G T A C T C A G C G T A C T A G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.9 +/- 26.4bp
Average Position of motif in Background57.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTCGGGTGAC
GTGGGGTGAT
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCGGGTGAC
ATGGGGTGAT
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCGGGTGAC
ATGGGGTGAT
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCGGGTGAC--
GTGGCGTGACNG
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTCGGGTGAC---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCGGGTGAC
RTCATGTGAC
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCGGGTGAC---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCGGGTGAC
GKMTCADRTTWC
 A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCGGGTGAC---
-TCACGTGACCGG
 A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T
A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCGGGTGAC
ATTCTCGCGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C T G A C G T A T C G C G T A A G T C
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T