Information for 13-TGCAAGWRASMAC (Motif 12)

A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A T G C A G C T A G T C G C A T A G T C A C G T A C G T A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 19.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCAAGWRASMAC
AAGGCAAGTGT----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAGWRASMAC
NATGTTGCAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGWRASMAC
ATATGCAAATNNN---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAGWRASMAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAGWRASMAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAGWRASMAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGCAAGWRASMAC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGCAAGWRASMAC
WATGCAAATGAG---
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCAAGWRASMAC
ATATGCAAAT------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAGWRASMAC
TTATGCAAAT------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A C T A G C T G A A T C G G T C A C G T A G T A C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T