Information for 3-TGCCAGAAGCCAATCC (Motif 8)

A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
Reverse Opposite:
C A T G A T C G G C T A C A G T A C G T A T C G T A C G A G T C C A G T C A G T G T A C G C A T T A C G A C T G A T G C G T C A
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.675
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif48.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.0 +/- 22.9bp
Average Position of motif in Background53.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCCAGAAGCCAATCC
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCCAGAAGCCAATCC
----ACTAGCCAATCA
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGAAGCCAATCC
ATGCCAGACN-------
 A C G T A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGCCAGAAGCCAATCC
-------TGCCAA---
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGAAGCCAATCC
NNVVCAGCTGBN-----
 A C G T A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGCCAGAAGCCAATCC
-----CGTGCCAAG--
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGCCAGAAGCCAATCC
----NGAAGC------
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCAGAAGCCAATCC
TGCCCCAGGGCA----
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCAGAAGCCAATCC
TGCCCCAGGGCA----
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCAGAAGCCAATCC
TGCCCCCGGGCA----
 A C G T A T C G G T A C A G T C C G T A A C T G G T C A G T C A A C T G A G T C A T G C G T C A G C T A C G A T T A G C G T A C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T