Information for 3-TTTGGCCCAG (Motif 3)

A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
Reverse Opposite:
A G T C G C A T T A C G C A T G A T C G T G A C G T A C G T C A C T G A T C G A
p-value:1e-14
log p-value:-3.252e+01
Information Content per bp:1.655
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif13.36%
Number of Background Sequences with motif2927.0
Percentage of Background Sequences with motif6.08%
Average Position of motif in Targets50.7 +/- 25.5bp
Average Position of motif in Background50.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TTTGGCCCAG---
---TGCCCAGNHW
 A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTGGCCCAG
NTTGGCANN-
 A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTTGGCCCAG
TGACCTTTGCCCCA-
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTGGCCCAG
-TTGGCA---
 A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGGCCCAG
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGCCCAG
NNTTGGCANN-
 A C G T A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTGGCCCAG
--AGGCCTAG
 A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTTGGCCCAG--
--TGACCTARTT
 A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGCCCAG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGCCCAG----
NNCNTGACCCCGCTCT
 A C G T A C G T A G C T G A C T C A G T C A T G A C T G T A G C G T A C A T G C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T