p-value: | 1e-3 |
log p-value: | -9.157e+00 |
Information Content per bp: | 1.937 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.35% |
Number of Background Sequences with motif | 5.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 52.4 +/- 30.9bp |
Average Position of motif in Background | 54.9 +/- 14.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA ----CCAGACAG- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTACCCAGACAGA--- CAAATCCAGACATCACA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA- ----CCAGACRSVB |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA -TGCCCAGNHW-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA ----BCAGACWA- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA -ATGCCAGACN-- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTACCCAGACAGA CTGCCCGCA---- |
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PB0121.1_Foxj3_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTACCCAGACAGA--- AACACCAAAACAAAGGA |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTACCCAGACAGA----- --AAACAGACAAAGGAAT |
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Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTACCCAGACAGA -CRCCCACGCA-- |
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