Information for 2-CTTGGAAGCCCCA (Motif 2)

G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G T A C G C T A G A G T C A G C T A G C T A G T C A G T C G T C A C T G A C T A G
p-value:1e-15
log p-value:-3.488e+01
Information Content per bp:1.796
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.7 +/- 23.6bp
Average Position of motif in Background53.0 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTGGAAGCCCCA
---NGAAGC----
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTGGAAGCCCCA
---GGAAANCCCC
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTGGAAGCCCCA
--GGAAATCCCC-
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTGGAAGCCCCA
CTTCTGGGAAA-----
 A C G T A C G T A C G T G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGAAGCCCCA
TTCTTGGAAAN----
 A C G T A C G T G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTGGAAGCCCCA-
--GGGAAATCCCCN
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGAAGCCCCA
AAGATCGGAANTNNNA
 A C G T A C G T A C G T G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTGGAAGCCCCA
--GGAAATTCCC-
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTTGGAAGCCCCA
GGGGGAATCCCC-
 G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGAAGCCCCA
CSTGGGAAAD----
 A C G T G A T C A G C T A C G T A C T G C T A G C T G A C T G A C T A G A G T C A T G C T G A C G T A C C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T