Information for 9-TGWCCTCTGT (Motif 17)

C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T
Reverse Opposite:
C T G A T G A C G C T A T C A G C T G A A C T G T A C G C G T A T A G C G T C A
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.540
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif516.7
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets54.0 +/- 25.3bp
Average Position of motif in Background51.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGWCCTCTGT
CTGACCTTTG-
 A C G T C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGWCCTCTGT
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGWCCTCTGT
TGACCYCT--
 C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGWCCTCTGT
TGACCTYA--
 C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGWCCTCTGT--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGWCCTCTGT--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGWCCTCTGT----
TGACCTTTGCCCTA
 C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGWCCTCTGT--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGWCCTCTGT-----
TGACCTTTGCCCTAN
 C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGWCCTCTGT----
TGACCTTTGCCCCA
 C A G T A T C G G C A T A T G C T G A C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A