Information for 18-TCTTCACTGTTCT (Motif 23)

A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T
Reverse Opposite:
C G T A C T A G C G T A C G T A A G T C C G T A A C T G C G A T A T C G C G T A C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.814e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 22.1bp
Average Position of motif in Background63.2 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCTTCACTGTTCT----
---TAATTGTTCTAAAC
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCACTGTTCT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCTTCACTGTTCT---
------CTGTTCCTGG
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTTCACTGTTCT---
NNTTTATTGTTCTNNN
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCACTGTTCT--
ANNTCCATTGTTCNNN
 A C G T A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTTCACTGTTCT----
-TTCAATTGTTCTAAAA
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTCACTGTTCT---
AANTTATTGTTCTNNA
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTTCACTGTTCT
---CCATTGTTTT
 A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTTCACTGTTCT---
GTATCTATTGTTCTTTA
 A C G T A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCACTGTTCT---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A G T C C G A T A C G T A T G C C G T A A G T C A C G T A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T