Information for 2-CCTTTGACCT (Motif 2)

G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T
Reverse Opposite:
T C G A C T A G A C T G A G C T A T G C C G T A G C T A C G T A C A T G C A T G
p-value:1e-18
log p-value:-4.260e+01
Information Content per bp:1.689
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif12.41%
Number of Background Sequences with motif2254.4
Percentage of Background Sequences with motif4.67%
Average Position of motif in Targets51.3 +/- 25.1bp
Average Position of motif in Background50.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGACCTC
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGACCTN
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT--
TGACCTCTGACCCCN
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGACCCC
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGACCCC
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGCCCTA
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTGACCT--
GTTGACCTTTGACCTTT
 A C G T A C G T A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGACCT-
TGACCTTTGACCCC
 A C G T A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTGACCT
TNCCTTTGATGT
 A C G T A C G T G T A C G T A C C G A T C G A T A C G T T A C G T C G A T G A C A G T C A G C T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T