Information for 3-TYTGTKCWWYTTGGAR (Motif 5)

A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A
Reverse Opposite:
G A C T A G C T A G T C A G T C G T C A C G T A C T G A C G A T C G A T A C T G T G A C C T G A T G A C G T C A T C G A T G C A
p-value:1e-16
log p-value:-3.903e+01
Information Content per bp:1.610
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif74.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets42.5 +/- 24.6bp
Average Position of motif in Background56.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TYTGTKCWWYTTGGAR
NNTGTTTATTTTGGCA
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:10
Orientation:forward strand
Alignment:TYTGTKCWWYTTGGAR
----------TTGGCA
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR--
---------NTTGGCANN
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR--
--------NNTTGGCANN
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR-
-CAATGCATTGTGGGTA
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR--
-----------TGGAAAA
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TYTGTKCWWYTTGGAR
ANATTTTTGCAANTN----
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR--
-------TTCTTGGAAAN
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TYTGTKCWWYTTGGAR-
------CTTCTGGGAAA
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TYTGTKCWWYTTGGAR---
---------NNTGGAAANN
 A C G T A G C T A C G T A C T G G A C T A C T G T G A C G C T A G C T A G A C T G C A T A C G T A C T G T A C G T C G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T