Information for 10-GGCTCATGAG (Motif 26)

A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.038e+01
Information Content per bp:1.960
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.0 +/- 14.6bp
Average Position of motif in Background48.0 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCTCATGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0031.1_Evx1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCATGAG----
NNNCACTAATTAGTNNT
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCTCATGAG--
--NTAATGAGCT
 A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCATGAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCTCATGAG----
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0058.1_Hoxb3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCATGAG----
TNNNACTAATTAGNTCA
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCATGAG----
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

NOTO/MA0710.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCTCATGAG-
-NNTAATTAGN
 A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T
A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCTCATGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCATGAG
NGGATTAN---
 A C G T A C T G A C T G A G T C A C G T G T A C C G T A A C G T A C T G C G T A A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T