Information for 6-TGTTGTCTCTTGCMAG (Motif 13)

A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
Reverse Opposite:
T A G C A G C T A C T G C T A G T G A C T G C A C G T A T A C G C T G A A C T G C T G A T A G C G T C A T G C A G T A C C G T A
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.709
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 34.6bp
Average Position of motif in Background58.1 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTTGTCTCTTGCMAG
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTTGTCTCTTGCMAG
TGTTTACTTAGG----
 A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTTGTCTCTTGCMAG
CNTGTTTACATA------
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTTGTCTCTTGCMAG
BSNTGTTTACWYWGN----
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTTGTCTCTTGCMAG
TGTTTACTTT------
 A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTTGTCTCTTGCMAG
TRTTTACTTW------
 A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTTGTCTCTTGCMAG
TCCATGTTTACTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTCTCTTGCMAG
NSTGTTTRCWCAGBNNN-
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTCTCTTGCMAG
CTGTTTAC---------
 A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTCTCTTGCMAG
CTTTGTTTACTTTTN----
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A T C G A G C T A G T C A G C T A G T C G C A T A C G T A C T G G A T C T G A C C T G A A T C G
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T A C G T A C G T