Information for 20-TCAGCAGTAGAAA (Motif 38)

A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
Reverse Opposite:
A C G T A C G T C A G T A T G C C G A T G T C A A G T C C G A T A C T G G A T C C G A T T C A G C G T A
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.765
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif52.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.6 +/- 23.1bp
Average Position of motif in Background37.9 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAGCAGTAGAAA--
ATTTACAGTAGCAAAA
 A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCAGTAGAAA-
ATTTGCATAACAAAG
 A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGCAGTAGAAA--
ATGTACAGTAGCAAAG
 A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCAGTAGAAA
GTCAGCANNTN---
 A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCAGTAGAAA
TGAGTCAGCA-------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCAGCAGTAGAAA
CTGAGTCAGCAATTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCAGCAGTAGAAA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCAGTAGAAA
NGTCAGCANTTT---
 A C G T A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCAGCAGTAGAAA-
ATTTGCATAACAATG
 A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TCAGCAGTAGAAA
HWWGTCAGCAWWTTT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C A T G G T A C C G T A C T A G A C G T C G T A A T C G G T C A C G T A C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T