Information for 15-CATTATGAGT (Motif 34)

A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 26.7bp
Average Position of motif in Background62.5 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATTATGAGT----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CATTATGAGT-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CATTATGAGT-
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CATTATGAGT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTATGAGT----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

BATF::JUN/MA0462.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATTATGAGT--
-GAAATGACTCA
 A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTATGAGT-
-NTAATGAGCT
 A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CATTATGAGT
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATTATGAGT
YCATTAMC---
 A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATTATGAGT---
NANTATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A