Information for 2-CCWTGSCCTCARGGMA (Motif 3)

T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A
Reverse Opposite:
C G A T A C T G A T G C A G T C A G T C C G A T T A C G C T G A C T A G A C T G A T C G G T A C G C T A C G T A C A T G A C T G
p-value:1e-29
log p-value:-6.741e+01
Information Content per bp:1.587
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif8.01%
Number of Background Sequences with motif577.6
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets51.9 +/- 22.6bp
Average Position of motif in Background49.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.85
Offset:5
Orientation:reverse strand
Alignment:CCWTGSCCTCARGGMA-
-----GCCTCAGGGCAT
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.84
Offset:5
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA-
-----SCCTSAGGSCAW
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA-
--ATTCCCTGAGGGGAA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA-
--ATTGCCTGAGGCGAA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA
---TGCCCTGAGGGCA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA-
---TTGCCCTAGGGCAT
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CCWTGSCCTCARGGMA
---TGCCCTNAGGGCA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCWTGSCCTCARGGMA
---TGCCCNNAGGGCA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA
----TGCCCCAGGGCA
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A
A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCWTGSCCTCARGGMA-
--ATTGCCTGAGGCAAT
 T G A C G T A C G C A T C G A T C A T G T A G C A G T C A G T C G A C T A T G C G C T A C T A G C T A G T A C G T G A C C G T A A C G T
A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T