Information for 17-RAAWATCCACATTGTA (Motif 21)

C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
Reverse Opposite:
A C G T G C T A A G T C C G T A C T G A A C G T A C T G C G A T A C T G A C T G G T C A A G C T C G T A A G C T A C G T A G T C
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.725
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.9 +/- 30.3bp
Average Position of motif in Background47.5 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:RAAWATCCACATTGTA--
---YDGHTACAWTGTADC
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:RAAWATCCACATTGTA--
---TWGHWACAWTGTWDC
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RAAWATCCACATTGTA----
---TGTTCCCATTGTGTACT
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.62
Offset:9
Orientation:forward strand
Alignment:RAAWATCCACATTGTA
---------CTTTGT-
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RAAWATCCACATTGTA
-AACAATAACATTGTT
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:forward strand
Alignment:RAAWATCCACATTGTA
-------CTCATTGTC
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RAAWATCCACATTGTA
---AGGVNCCTTTGT-
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:RAAWATCCACATTGTA-----
----AATCGCACTGCATTCCG
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

SOX21/MA0866.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RAAWATCCACATTGTA
-AACACTACCATTGTT
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:8
Orientation:forward strand
Alignment:RAAWATCCACATTGTA--
--------CCATTGTTYB
 C T A G G T C A C T G A C G A T C T G A C A G T A G T C G T A C C G T A A G T C C G T A G A C T A C G T A C T G C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G