Information for 1-GGTCASNSTGACCTBR (Motif 1)

C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
Reverse Opposite:
G A C T T C G A C T G A C A T G C T A G C A G T A G T C G C T A A T G C G A T C T A G C C G A T C T A G G T C A G T A C G T A C
p-value:1e-63
log p-value:-1.451e+02
Information Content per bp:1.599
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif228.8
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.5 +/- 18.9bp
Average Position of motif in Background52.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
GGTCANNGTGACCTN-
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GGTCASNSTGACCTBR
AGGNCANNGTGACCT--
 A C G T C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--GGTCASNSTGACCTBR
AAGGTCACGGTGACCTG-
 A C G T A C G T C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G A C G T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----GGTCASNSTGACCTBR
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C G T C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.70
Offset:8
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
--------TGACCTYA
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.68
Offset:8
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
--------TGACCT--
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCASNSTGACCTBR
AGNACAGNCTGTTCTN-
 A C G T C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
-------GTGACCTT-
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
--------TGACCYCT
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTCASNSTGACCTBR
GRACAGWMTGTYCTB-
 C A T G C A T G A C G T A G T C G C T A A T C G C T A G T A C G C G A T T C A G G T C A G A T C G A T C G A C T A G C T C T G A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T