Information for 3-CCTSAGGSCW (Motif 3)

A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
Reverse Opposite:
G C A T C A T G A T C G A G T C G A T C A C G T T A G C C T G A C T A G A C T G
p-value:1e-35
log p-value:-8.062e+01
Information Content per bp:1.647
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif27.95%
Number of Background Sequences with motif5481.9
Percentage of Background Sequences with motif11.40%
Average Position of motif in Targets50.1 +/- 26.5bp
Average Position of motif in Background49.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CCTSAGGSCW-
SCCTSAGGSCAW
 A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CCTSAGGSCW-
GCCTCAGGGCAT
 A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CCTSAGGSCW-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CCTSAGGSCW-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CCTSAGGSCW-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCTSAGGSCW
CGCCTCAGGCA-
 A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCTSAGGSCW
AGCCTCAGGCA-
 A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCTSAGGSCW
TGCCCCAGGGCA
 A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CCTSAGGSCW
TGCCTGAGGCN-
 A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CCTSAGGSCW
TGCCCCAGGGCA
 A C G T A C G T A G T C A G T C A G C T A T C G T G C A C T A G A C T G T A G C G T A C C G T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A