Information for 16-MGCWAATCCMYTT (Motif 26)

G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G A C G T A C T G A C T G C G T A C G A T A C G T C G T A C T A G A G T C A C G T
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 23.7bp
Average Position of motif in Background78.6 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:MGCWAATCCMYTT
--CTAATCCTCTT
 G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0035.1_Gsc/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---MGCWAATCCMYTT-
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---MGCWAATCCMYTT
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--MGCWAATCCMYTT--
NTAGTTAATCCCCTTAN
 A C G T A C G T G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:MGCWAATCCMYTT--
CNATAATCCGNTTNT
 G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:MGCWAATCCMYTT
-GCTAATCC----
 G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-MGCWAATCCMYTT--
AGGCTAATCCCCAANG
 A C G T G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:MGCWAATCCMYTT
-GCTAATCCCC--
 G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:forward strand
Alignment:MGCWAATCCMYTT
-NYTAATCCYB--
 G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--MGCWAATCCMYTT--
NTTGTTAATCCCTCTNN
 A C G T A C G T G T C A A C T G A G T C C G A T C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A