Information for 9-CCAGCTGGCG (Motif 9)

A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
Reverse Opposite:
G T A C C A T G G A T C G A T C G T C A A T C G T A G C C A G T C A T G T C A G
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.659
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif10.71%
Number of Background Sequences with motif2193.9
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets48.6 +/- 26.6bp
Average Position of motif in Background49.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGGCG-
GCCAGCTGBTNB
A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGCG
NAHCAGCTGD--
A C G T A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGCG
NAACAGCTGG--
A C G T A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGCG
NNVCAGCTGB--
A C G T A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGGCG-
NVCAGCTGBBNN
A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCAGCTGGCG
NCAGCTGCTG
A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGCG
NAACAGCTGT--
A C G T A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGCG
NNGCAGCTGTC-
A C G T A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGGCG
AACAGATGGC-
A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGGCG
ANCAGCTG---
A C G T A G T C G T A C G T C A A T C G T A G C C A G T C T A G C T A G G T A C C A T G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T