p-value: | 1e-8 |
log p-value: | -1.948e+01 |
Information Content per bp: | 1.934 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 3.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.2 +/- 21.1bp |
Average Position of motif in Background | 68.3 +/- 25.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCGCTTGCCTGCC NNACTTGCCTT-- |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCGCTTGCCTGCC- ----TTGCGTGCVA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCGCTTGCCTGCC GTCATGCHTGRCTGS- |
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PAX5/MA0014.2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCGCTTGCCTGCC--- GTCACGCTTGGCTGCNCNN |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCGCTTGCCTGCC NGTCACGCTTGGCTGC- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCGCTTGCCTGCC ----TWGTCTGV- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GCGCTTGCCTGCC---- --------CTGCCCGCA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCGCTTGCCTGCC --VBSYGTCTGG- |
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HES7/MA0822.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCGCTTGCCTGCC TGGCACGTGCCA--- |
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EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCGCTTGCCTGCC ---ATTTCCTGTN |
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