Information for 3-HVCYCCCHGGGRA (Motif 3)

G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A
Reverse Opposite:
G A C T A G T C A G T C A G T C G A T C C T G A C T A G C T A G T C A G T C A G C T A G A G T C C T A G
p-value:1e-25
log p-value:-5.917e+01
Information Content per bp:1.591
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif19.48%
Number of Background Sequences with motif3701.5
Percentage of Background Sequences with motif7.95%
Average Position of motif in Targets52.1 +/- 24.8bp
Average Position of motif in Background49.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:HVCYCCCHGGGRA
-GTCCCCAGGGGA
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:HVCYCCCHGGGRA
-NGTCCCNNGGGA
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
-ANTCCCTNGGGAAT
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
ACCCCCCCGGGGGGN
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
NCCCCCCCGGGGGGN
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
-CCCCCCCGGGGGNN
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
NTCGCCTCAGGCAAT
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
NTCCCCTCAGGGANT
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---HVCYCCCHGGGRA-
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:HVCYCCCHGGGRA--
GCACCCCTGGGTGCC
 G A T C T C A G G A T C A G T C A G T C A G T C G A T C G A C T C T A G C T A G T C A G C T A G C T G A A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C