Information for 5-GGATTCASCCCAA (Motif 8)

A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
Reverse Opposite:
A C G T A C G T C T A G A C T G A C T G T A C G G C A T A C T G G T C A T C G A C G A T A G T C A G T C
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.738
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.7 +/- 22.0bp
Average Position of motif in Background41.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGATTCASCCCAA
---ATCACCCCAT
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGATTCASCCCAA
---ATCACCCCAT
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGATTCASCCCAA
---ATCACCCCAC
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGATTCASCCCAA
GGGGATTCCCCC---
 A C G T A C G T A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGATTCASCCCAA
-CNGTCACGCCAC
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGATTCASCCCAA-
--TTTCCCGCCAAA
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A A C G T
A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGATTCASCCCAA
TGGTTTCAGT----
 A C G T A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGATTCASCCCAA
GGACACACCCCC-
 A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGATTCASCCCAA
TGGCACCATGCCAA
 A C G T A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGATTCASCCCAA
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G G C T A A G C T A C G T A G T C C G T A A T G C T G A C G T A C A G T C G T C A T C G A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A