Information for 10-CTGTCTGATG (Motif 19)

A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C C G T A A C T G C G T A A G T C C G T A C T A G
p-value:1e-4
log p-value:-1.087e+01
Information Content per bp:1.964
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.4 +/- 19.5bp
Average Position of motif in Background46.6 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGTCTGATG
CTGTCTGG--
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGTCTGATG
TWGTCTGV--
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGATG
VBSYGTCTGG--
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGATG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGATG-
TTTGATTGATGN
 A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGTCTGATG-
-TGATTGATGA
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCTGATG-----
NNNNNATTGATGNGTGN
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGTCTGATG----
----ATGATGCAAT
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGTCTGATG----
----MTGATGCAAT
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGTCTGATG---
-TGATTRATGGCY
 A G T C A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C